CDS

Accession Number TCMCG056C01218
gbkey CDS
Protein Id XP_031404487.1
Location join(5501057..5501149,5501246..5501467,5501847..5501969,5502252..5502335,5502460..5502510,5503532..5503624,5504377..5504517,5504611..5504691,5505203..5505450,5505531..5505702,5505953..5506065,5506188..5506245,5506596..5506661,5506799..5507011,5507118..5507169,5508072..5508445,5508744..5508838,5509529..5509771,5510174..5510817,5510987..5511190,5511355..5511554)
Gene LOC116213608
GeneID 116213608
Organism Punica granatum

Protein

Length 1189aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA580467
db_source XM_031548627.1
Definition tetratricopeptide repeat protein SKI3 [Punica granatum]

EGGNOG-MAPPER Annotation

COG_category A
Description tetratricopeptide repeat
KEGG_TC -
KEGG_Module M00392        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K12600        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000184        [VIEW IN EMBL-EBI]
GO:0000288        [VIEW IN EMBL-EBI]
GO:0000291        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034427        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0035327        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043928        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0055087        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070478        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGAAAGAAGAAGAAGCAGCTTCTGCCCTGAAGCAATTGCAGGAGTCCGTCGACGCTCACCCCGACGACCCCAACCTCCACTTCGATCTCGGCGTTCACCTGTGGGAGAAGGGAGGCGGGAGCAGCGAGGACGCCGCAGCCGCGAAGGACCGAGCTGCCGAGCATTTTGTGATTTCTGCTAAGCTGAACCCCCAAAATGCGGCAGCTTTCAGGTACTTGGGACACTATTACGGTGAAGACCGGGATGCCCAAAGAGCTATCAAGTGTTACCAGAGAGCTGTCACTCTTAATGCAGATGACCGTGAAGCTGGGGAAGCAGCGTGCAATTTGTTGGACCGAGAAGGGAAGGAGAGTTTGGAAGTGGCAGTATGCAGGGAAGCTTCAGATAAGTCACCCAGGGCTTTCTGGGCTTTCCGGAGATTAGGTTACCTGCAGGTCCATAAAAAGAAATGGTCAGAAGCTGTCCCAAGTCTTCAGAGTGCCATTCGGGGCTATCCATCCTGCACTGATTTATGGGAAGCGCTAGGTCTTGCTTACCAGCGGCTGGGCATGTATACTGCTGCTATTAAGTCGTATGGGAGAGCAATTGAATTGGACAGCGCTAGAATTTTTGCTCGGGTGGAAAGTGGAAACATTTTTATGATGCTTGGTTCCTTTAGAAAGGGAATTGAACAATTCGAGAAGGCGCTTGAGATCTCACCTCAAAATTTGTCTGCAAATTATGGACTTGCATCTGCGCTGTTTGGCCTTTCTAGGGAATGTATCAATACTGGGGCATTTAGATGGGGAGCCTCATTATTAGAGGATGCATCTAAAGTCATGCGATTGTGCACTCAACTTGCTGGAAATCAATCATCCGTGTGGAAGCTGGATGCTGATATTCAGATTTTATATTCAAAATGCTTCCCATGGATGGTTGAAGAGCAGGCTTTGCAACTAGATGCAGGTGCCTTTAACAAGTCTATCCTTTCATGGAATGAGACTTGCTGTTCAGCTGCAAGATCGGCTAGAATTTCTTATCAGAAAGCACTGCATGTGGCACCTTGGTGTGCTAATATCTACATGGACATTGCAATAAGTTCTGATCTCATTTCCTCACTAAACGGCGCTTCTTGCAATGAGATAAATTCTTGGCAGTTACCTGAAAAGATGGCTTTGGGTGCTTTGTTACTTGAGTGTGAAAATTACGAGTCGTGGGTGGCACTGGGATGCCTATCTGATCATGACGCATTGAAACAGCATTCCTTGATCAGGGCATTGCAACTAGATGCATCCCTTGCAGGCGCTTGGGCACACCTTGGGAAGCTCTATAGAAGATTCAACAAGCAATTGGCAAGACAAGCATTTGACAGTGCTAGAAGCATAGATCCTTCTCTTGCTTTACCATGGGCCGGCATGTCAGCTGATTCTCATACAGGCGAGGTTGTCCCAGATGAGGCTTTTGAGAGCTGTTTGCGTGCTGTCCAGATACTTCCTCTTGCAGAGTTCCAAATTGGTCTGACAAAGCTTGCTCTTCTTTCAGGATATTCAGCATCTTCACAGGTATTTGGAGCCATCTGCCAAGCTGTCCAGCGGGCCCCCAATTACCCTGAATCCCATAATCTGAAGGGGCTGATATTTGAGGCAAGGCGTGATTATCAGTCAGCTGTGGCCTCTTATAGAGCAGCACGCCATGCGATCAGCAGATTATCTGGCACTTGTCCGGAATCTTGTATGAGAGATGTAACTGTTAATTTGGCAAGATCACTCAGCAAGTTGGGGAATGCTCTAGATGCTGTGAGAGAATGTGATGATTTGACAAAGGAAGGGCCGCTTGATGAGGAAGGATTGCATATATATGCCTATTCTCTATGGCAACTTGGCAATAACGAGCTGGCTCTTTCTACGGCCAGAAATCTCGCAGCCAAAATTCCTAGCATGGAAAAGTCGGCCATGGCAGCCTCTGTTAGTTTTATATGCAGACTGCTGTATTATATATCTGGACTCGATTCAGCAATTAACAGCATTCTAAAGATGCCAAAGAATCTGTTTGAGAGTGCAAATATCAGCTTTATCTTGTCTGCAGTCAATGTTTTTGATGAAAATGGTCGGTTGAACCAGATCATTTCTGGGAGCCGACGATTTCTTACATCTCATGCAGACATATCAGAAATGCATTTTTTGATTGCGCTAAGTAAGCTGATCAAGAATAGTTCCGAGTTTGGCCTTGGATATCAAACTGGAATTCATCATCTTCGGAAAGCTCTTCACATGTTTCCTAATAGTAATTTACTAAGGCAGTCCCTTGGTTATCTTTTGCTGCTGAGCAAGAGATGGACTGATTCTCATGTAGCAACTCGGTGCAGCATCTTAAGCTCCTCTGGTTTTTCCCGTGAAGGAGGCCCCAGATCTGCATATGAGATCCTTGGCGCTGGAGCAGTTGCTTGTTATGCTGTCGGGAATAGCGGTCCCAAATTTTCCTTCCCAACTTGCCCATGCCAGTCCTTGAACCAACCTCAAGCTGTTCAACAGCTGCAAAGATGGTTACATCAAGAGCCATGGAATCCTAATGCTCGGTATCTGCTAATACTAAACCTCTTACAAAGAGCACGAGAAGAGAAATTTCCTCCACAACTGTGCGGTGCGATTGGTAGGCTAATTCATGTGGCTCTGTCAATTAAGTCATATCCGATGGAAGAAACATCCTTTCAGCATCAACGGTTCCAGCTTCTACTATGTGCTTCTGAGATGAGCTTTCAGGAAGGGAACCAAGTTAAATGCATCAACCACGCGAGGGAAGCATCAGAACTGCTGCTTCCTCACAGCTATCTCTTCTTTGCACATTTGTTATTATGTCGTGCGTATGCTGTGGAAGGTGACTCGGAGAACGTTCAAAGAGAATTTCTGCAATGCTTGAAGTTCGGAACAGATTTTCATATTGGTTGGATCAGTCTGAAATTGATGCAACTTCTTTACAATGTGGAAAACGATTCGAATATCTTGGACTCCAGTTTGGATGATTGCTTGAAAAAGAGGGAGAGCTCACGAGATATGTGTGCCGCAGTCTTCAATTTGATAGAGGGTTTAGTCGCTTTGCATAACAAGGATTTCGCATCTGCAGAAGAATTTCTAGCACAAGCTTGCTCTTTGATGGGTTCTGATAGTTGCAGCTTGCTCTGTCACGGTGTTGCCTGTATGCAGCTAGCAAAGTGGGGTTATGGCGCACAGTTTCTATCGGATGCAATAAGAAGCCTCCAGAAAGTGCGTGAGACGGCTATAATTCCCTTGCCAATTGTTTCGACATTGCTAGCCCAAGCAGAAGGAAGCTTGGGTTCTCGAGACAAATGGGAGCAGAACCTTCGCCTTGAATGGTATACTTGGTCGCCAGAAATGAGGCCCGCAGAGCTGTATTTTCAGATGCATTTGCTTTCAGAGCATTCCAACGCCGAGAAGACGTGCCCAGTTGTCAGGTGCCAAAGCCCTCTAAAATGGGTCTCCCGAGCAATCCACGTGGACCCGTCTTCTTCACGATACTGGAAGATCTTGCAGAAGCACGCAAGACCAACTGCTCTCGAGCAGTGTACTTAG
Protein:  
MEKEEEAASALKQLQESVDAHPDDPNLHFDLGVHLWEKGGGSSEDAAAAKDRAAEHFVISAKLNPQNAAAFRYLGHYYGEDRDAQRAIKCYQRAVTLNADDREAGEAACNLLDREGKESLEVAVCREASDKSPRAFWAFRRLGYLQVHKKKWSEAVPSLQSAIRGYPSCTDLWEALGLAYQRLGMYTAAIKSYGRAIELDSARIFARVESGNIFMMLGSFRKGIEQFEKALEISPQNLSANYGLASALFGLSRECINTGAFRWGASLLEDASKVMRLCTQLAGNQSSVWKLDADIQILYSKCFPWMVEEQALQLDAGAFNKSILSWNETCCSAARSARISYQKALHVAPWCANIYMDIAISSDLISSLNGASCNEINSWQLPEKMALGALLLECENYESWVALGCLSDHDALKQHSLIRALQLDASLAGAWAHLGKLYRRFNKQLARQAFDSARSIDPSLALPWAGMSADSHTGEVVPDEAFESCLRAVQILPLAEFQIGLTKLALLSGYSASSQVFGAICQAVQRAPNYPESHNLKGLIFEARRDYQSAVASYRAARHAISRLSGTCPESCMRDVTVNLARSLSKLGNALDAVRECDDLTKEGPLDEEGLHIYAYSLWQLGNNELALSTARNLAAKIPSMEKSAMAASVSFICRLLYYISGLDSAINSILKMPKNLFESANISFILSAVNVFDENGRLNQIISGSRRFLTSHADISEMHFLIALSKLIKNSSEFGLGYQTGIHHLRKALHMFPNSNLLRQSLGYLLLLSKRWTDSHVATRCSILSSSGFSREGGPRSAYEILGAGAVACYAVGNSGPKFSFPTCPCQSLNQPQAVQQLQRWLHQEPWNPNARYLLILNLLQRAREEKFPPQLCGAIGRLIHVALSIKSYPMEETSFQHQRFQLLLCASEMSFQEGNQVKCINHAREASELLLPHSYLFFAHLLLCRAYAVEGDSENVQREFLQCLKFGTDFHIGWISLKLMQLLYNVENDSNILDSSLDDCLKKRESSRDMCAAVFNLIEGLVALHNKDFASAEEFLAQACSLMGSDSCSLLCHGVACMQLAKWGYGAQFLSDAIRSLQKVRETAIIPLPIVSTLLAQAEGSLGSRDKWEQNLRLEWYTWSPEMRPAELYFQMHLLSEHSNAEKTCPVVRCQSPLKWVSRAIHVDPSSSRYWKILQKHARPTALEQCT